Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium uptake protein trka | SAMN04490193_6099 | Not Available | Negative | 6417741 - 6419114 | 49673.0 |
| 16s rrna m(5)c-967 methyltransferase | SAMN04490193_6100 | Not Available | Negative | 6419137 - 6420447 | 47318.0 |
| methionyl-trna formyltransferase | SAMN04490193_6101 | Not Available | Negative | 6420444 - 6421397 | 33672.9 |
| peptide deformylase | SAMN04490193_6102 | Not Available | Negative | 6421467 - 6421973 | 19354.5 |
| dna processing protein | SAMN04490193_6103 | Not Available | Positive | 6422228 - 6423331 | 38871.2 |
| translation factor sua5 | SAMN04490193_6104 | Not Available | Positive | 6423407 - 6423964 | 20641.8 |
| nadph2:quinone reductase | SAMN04490193_6105 | Not Available | Negative | 6424023 - 6425000 | 34143.8 |
| coproporphyrinogen oxidase | SAMN04490193_6106 | Not Available | Positive | 6425189 - 6426121 | 35235.1 |
| shikimate dehydrogenase | SAMN04490193_6107 | Not Available | Positive | 6426121 - 6426942 | 29311.1 |
| sulfate permease, sulp family | SAMN04490193_6108 | Not Available | Negative | 6426943 - 6428511 | 56227.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





