Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04490193_6079 | Not Available | Positive | 6392803 - 6393309 | 18805.7 |
| fecr family protein | SAMN04490193_6080 | Not Available | Positive | 6393309 - 6394253 | 35172.8 |
| iron complex outermembrane recepter protein | SAMN04490193_6081 | Not Available | Positive | 6394346 - 6396784 | 89343.3 |
| trna modification gtpase trme | SAMN04490193_6082 | Not Available | Negative | 6396845 - 6398215 | 48711.3 |
| protein translocase subunit yidc | SAMN04490193_6083 | Not Available | Negative | 6398295 - 6399998 | 62592.1 |
| hypothetical protein | SAMN04490193_6084 | Not Available | Negative | 6400001 - 6400246 | 9200.2 |
| ribonuclease p protein component | SAMN04490193_6085 | Not Available | Negative | 6400239 - 6400646 | 15259.6 |
| chromosomal replication initiator protein dnaa | SAMN04490193_6086 | Not Available | Positive | 6401380 - 6402900 | 56898.9 |
| dna polymerase iii, beta subunit | SAMN04490193_6087 | Not Available | Positive | 6402939 - 6404042 | 40603.0 |
| dna replication and repair protein recf | SAMN04490193_6088 | Not Available | Positive | 6404063 - 6405166 | 41520.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





