Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04490193_6006 | Not Available | Negative | 6310184 - 6310828 | 23975.2 |
| gtpase, g3e family | SAMN04490193_6007 | Not Available | Negative | 6310828 - 6312033 | 45449.0 |
| transcriptional regulator, trar/dksa family | SAMN04490193_6008 | Not Available | Negative | 6312061 - 6312465 | 15737.7 |
| hypothetical protein | SAMN04490193_6009 | Not Available | Positive | 6312592 - 6312960 | 12994.6 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04490193_6010 | Not Available | Negative | 6312957 - 6314168 | 43617.7 |
| gtp cyclohydrolase i | SAMN04490193_6011 | Not Available | Positive | 6314297 - 6315187 | 32375.9 |
| zinc/manganese transport system atp-binding protein | SAMN04490193_6012 | Not Available | Positive | 6315184 - 6315852 | 24191.5 |
| zinc/manganese transport system permease protein | SAMN04490193_6013 | Not Available | Positive | 6315852 - 6316718 | 30376.8 |
| zinc/manganese transport system substrate-binding protein | SAMN04490193_6014 | Not Available | Positive | 6316730 - 6317608 | 31593.8 |
| phosphoribosyl-amp cyclohydrolase | SAMN04490193_6015 | Not Available | Positive | 6317617 - 6318018 | 14619.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





