Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, rpir family | SAMN04490193_5996 | Not Available | Negative | 6297162 - 6298028 | 31137.8 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_5997 | Not Available | Negative | 6298190 - 6301063 | 107736.0 |
| atp-dependent dna helicase uvrd | SAMN04490193_5998 | Not Available | Positive | 6301343 - 6303526 | 81208.9 |
| predicted lipid-binding transport protein, tim44 family | SAMN04490193_5999 | Not Available | Positive | 6303716 - 6304585 | 30665.6 |
| smi1-knr4 cell-wall | SAMN04490193_6000 | Not Available | Positive | 6304719 - 6305126 | 15559.9 |
| transporter, cpa2 family | SAMN04490193_6001 | Not Available | Negative | 6305202 - 6306965 | 64126.6 |
| acyl-coa hydrolase | SAMN04490193_6002 | Not Available | Positive | 6307257 - 6307742 | 18205.8 |
| pyridoxal kinase | SAMN04490193_6003 | Not Available | Negative | 6307798 - 6308670 | 31237.0 |
| protein of unknown function | SAMN04490193_6004 | Not Available | Positive | 6308788 - 6309183 | 14790.9 |
| gtpase, g3e family | SAMN04490193_6005 | Not Available | Negative | 6309177 - 6310139 | 34883.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





