Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein impa | SAMN04490193_5936 | Not Available | Positive | 6222383 - 6223402 | 36777.2 |
| type vi secretion system protein impb | SAMN04490193_5937 | Not Available | Positive | 6223457 - 6223963 | 18459.3 |
| type vi secretion system protein impc | SAMN04490193_5938 | Not Available | Positive | 6223966 - 6225462 | 55663.4 |
| hypothetical protein | SAMN04490193_5939 | Not Available | Negative | 6225393 - 6225572 | 6413.52 |
| type vi secretion system secreted protein hcp | SAMN04490193_5940 | Not Available | Positive | 6225638 - 6226126 | 17473.9 |
| type vi secretion system protein impf | SAMN04490193_5941 | Not Available | Positive | 6226334 - 6226849 | 18906.6 |
| type vi secretion system protein impg | SAMN04490193_5942 | Not Available | Positive | 6226846 - 6228705 | 69288.7 |
| type vi secretion system protein imph | SAMN04490193_5943 | Not Available | Positive | 6228669 - 6229712 | 39054.0 |
| type vi secretion system protein vasg | SAMN04490193_5944 | Not Available | Positive | 6229705 - 6232368 | 97210.8 |
| type vi secretion system secreted protein vgrg | SAMN04490193_5945 | Not Available | Positive | 6232466 - 6234406 | 72391.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





