Pseudomonas marginalis strain BS2952

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas marginalis strain BS2952 is a Gram-negative, rod-shaped bacterium that thrives in aerobic conditions. It is particularly adapted to habitats characterized by metal-contaminated soil, showcasing its potential role in bioremediation processes. This strain exhibits psychrotolerant properties, with an optimal growth temperature of 16°C, allowing it to survive in cooler environments. The organism possesses a single replicon, which may influence its genomic stability and adaptability. Pseudomonas marginalis strain BS2952 has been associated with the plant host Brassica oleracea var. italica, commonly known as broccoli. This relationship suggests potential interactions that could be beneficial for both the bacterium and the plant, possibly in terms of nutrient cycling or plant health. Given its habitat and host associations, Pseudomonas marginalis strain BS2952 may play a significant role in the ecological dynamics of metal-contaminated soils, potentially aiding in the detoxification of pollutants through its metabolic processes. Its psychrotolerant nature further implies that it could be an important player in ecosystems subject to climate variations, particularly in cooler regions where metal contamination is a concern. This strain exemplifies the complex interactions between microbes and their environments, highlighting its importance in both ecological and biotechnological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas marginalis
Strainstrain BS2952

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas marginalis strain BS2952
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
Habitatmetal contaminated soil
Biotic relationshipNot Available
Host(s)Brassica oleracea var. italica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas marginalis strain BS2952 genome assembly, contig:

Gene Summary

Adenine Count

1426364 bp

Thymine Count

1441537 bp

Guanine Count

2205788 bp

Cytosine Count

2197626 bp

Genome Length

7271315 bp

Protein-coding Genes

6396 genes

Non-Coding Genes

251 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alanine racemaseSAMN04490193_5886Not AvailableNegative6168616 - 616968938684.8
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN04490193_5887Not AvailableNegative6169769 - 617012212841.6
d-amino acid dehydrogenase small subunitSAMN04490193_5888Not AvailableNegative6170094 - 617139547094.7
transcriptional regulator, asnc familySAMN04490193_5889Not AvailablePositive6171552 - 617204018716.9
hypothetical proteinSAMN04490193_5890Not AvailableNegative6172037 - 617239012991.7
glycine/d-amino acid oxidaseSAMN04490193_5891Not AvailablePositive6172506 - 617379846602.2
uncharacterized conserved protein yjis, duf1127 familySAMN04490193_5892Not AvailableNegative6173799 - 61740238863.59
dna-binding transcriptional regulator, mocr family, contains an aminotransferase domainSAMN04490193_5893Not AvailablePositive6174190 - 617561452657.2
phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthaseSAMN04490193_5894Not AvailablePositive6175674 - 617724257927.2
cyanate permeaseSAMN04490193_5895Not AvailableNegative6177255 - 617839740156.6

Displaying genes 5691 – 5700 of 6647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ChlorosisCausesPMC12847849
Internal stem discolorationCausesPMC12847849

Displaying health effects 1 – 2 of 2 in total