Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | SAMN04490193_5886 | Not Available | Negative | 6168616 - 6169689 | 38684.8 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04490193_5887 | Not Available | Negative | 6169769 - 6170122 | 12841.6 |
| d-amino acid dehydrogenase small subunit | SAMN04490193_5888 | Not Available | Negative | 6170094 - 6171395 | 47094.7 |
| transcriptional regulator, asnc family | SAMN04490193_5889 | Not Available | Positive | 6171552 - 6172040 | 18716.9 |
| hypothetical protein | SAMN04490193_5890 | Not Available | Negative | 6172037 - 6172390 | 12991.7 |
| glycine/d-amino acid oxidase | SAMN04490193_5891 | Not Available | Positive | 6172506 - 6173798 | 46602.2 |
| uncharacterized conserved protein yjis, duf1127 family | SAMN04490193_5892 | Not Available | Negative | 6173799 - 6174023 | 8863.59 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN04490193_5893 | Not Available | Positive | 6174190 - 6175614 | 52657.2 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase | SAMN04490193_5894 | Not Available | Positive | 6175674 - 6177242 | 57927.2 |
| cyanate permease | SAMN04490193_5895 | Not Available | Negative | 6177255 - 6178397 | 40156.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





