Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_5825 | Not Available | Negative | 6105334 - 6105942 | 21528.2 |
| outer membrane usher protein fimd/papc | SAMN04490193_5826 | Not Available | Negative | 6105899 - 6108277 | 84908.8 |
| p pilus assembly protein, chaperone papd | SAMN04490193_5827 | Not Available | Negative | 6108413 - 6109126 | 25690.2 |
| protein of unknown function | SAMN04490193_5828 | Not Available | Negative | 6109219 - 6109896 | 24283.3 |
| protein of unknown function | SAMN04490193_5829 | Not Available | Negative | 6109950 - 6110609 | 23338.0 |
| ppx/gppa phosphatase | SAMN04490193_5830 | Not Available | Positive | 6111105 - 6112607 | 56292.6 |
| polyphosphate kinase | SAMN04490193_5831 | Not Available | Negative | 6112776 - 6115001 | 83142.5 |
| porphobilinogen synthase | SAMN04490193_5832 | Not Available | Negative | 6115020 - 6116033 | 37026.2 |
| membrane protein deda, snare-associated domain | SAMN04490193_5833 | Not Available | Positive | 6116242 - 6116880 | 23798.6 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04490193_5834 | Not Available | Negative | 6116861 - 6118096 | 47060.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





