Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_5814 | Not Available | Positive | 6096511 - 6096993 | 17670.0 |
| cdp-4-dehydro-6-deoxyglucose reductase | SAMN04490193_5815 | Not Available | Negative | 6097028 - 6097996 | 35713.0 |
| 3-octaprenyl-4hydroxybenzoate decarboxylase | SAMN04490193_5816 | Not Available | Negative | 6097996 - 6099462 | 54705.3 |
| transcription termination factor rho | SAMN04490193_5817 | Not Available | Negative | 6099620 - 6100879 | 46957.1 |
| thioredoxin | SAMN04490193_5819 | Not Available | Negative | 6101112 - 6101441 | 11816.2 |
| gntr family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex | SAMN04490193_5820 | Not Available | Negative | 6101563 - 6102258 | 24936.1 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN04490193_5821 | Not Available | Positive | 6102514 - 6103299 | 27924.0 |
| amino acid abc transporter membrane protein 1, paat family | SAMN04490193_5822 | Not Available | Positive | 6103314 - 6103982 | 24657.8 |
| amino acid abc transporter membrane protein 2, paat family | SAMN04490193_5823 | Not Available | Positive | 6103979 - 6104629 | 23659.5 |
| amino acid abc transporter atp-binding protein, paat family | SAMN04490193_5824 | Not Available | Positive | 6104616 - 6105353 | 26857.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





