Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic triphosphatase ygif, contains cyth and chad domains | SAMN04490193_5783 | Not Available | Positive | 6065554 - 6066921 | 52069.2 |
| transcriptional regulator, asnc family | SAMN04490193_5784 | Not Available | Negative | 6066963 - 6067433 | 17648.4 |
| hypothetical protein | SAMN04490193_5785 | Not Available | Positive | 6067561 - 6067899 | 12457.9 |
| general secretion pathway protein e | SAMN04490193_5786 | Not Available | Positive | 6067983 - 6069662 | 60950.8 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN04490193_5787 | Not Available | Positive | 6069740 - 6070660 | 33294.6 |
| hypothetical protein | SAMN04490193_5788 | Not Available | Positive | 6070671 - 6071117 | 16197.0 |
| conserverd hypothetical protein | SAMN04490193_5789 | Not Available | Positive | 6071187 - 6071504 | 10947.1 |
| opacity protein | SAMN04490193_5790 | Not Available | Positive | 6071674 - 6072339 | 24919.0 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04490193_5791 | Not Available | Positive | 6072498 - 6073640 | 41316.6 |
| glycine cleavage system h protein | SAMN04490193_5792 | Not Available | Negative | 6073706 - 6074089 | 13272.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





