Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ptsintr with gaf domain, ptsp | SAMN04490193_5742 | Not Available | Negative | 6022242 - 6024521 | 83369.3 |
| putative (di)nucleoside polyphosphate hydrolase | SAMN04490193_5743 | Not Available | Negative | 6024544 - 6025023 | 18835.6 |
| had-superfamily subfamily ib hydrolase, tigr01490 | SAMN04490193_5744 | Not Available | Positive | 6025167 - 6025826 | 24830.4 |
| uncharacterized membrane protein | SAMN04490193_5745 | Not Available | Negative | 6025851 - 6026267 | 15085.1 |
| l-threonine ammonia-lyase | SAMN04490193_5746 | Not Available | Negative | 6026309 - 6027823 | 54913.9 |
| ribose-5-phosphate isomerase | SAMN04490193_5747 | Not Available | Positive | 6027961 - 6028632 | 23366.2 |
| uncharacterized protein yjik | SAMN04490193_5748 | Not Available | Negative | 6028651 - 6029565 | 34416.3 |
| uncharacterized protein yjik | SAMN04490193_5749 | Not Available | Negative | 6029687 - 6030613 | 34669.4 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN04490193_5750 | Not Available | Negative | 6030950 - 6031615 | 23592.4 |
| fad/fmn-containing dehydrogenase | SAMN04490193_5751 | Not Available | Negative | 6031638 - 6033056 | 51976.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





