Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | SAMN04490193_5679 | Not Available | Positive | 5956478 - 5956729 | 9288.95 |
| dna-(apurinic or apyrimidinic site) lyase | SAMN04490193_5680 | Not Available | Negative | 5956970 - 5957782 | 29990.6 |
| hd-like signal output (hdod) domain, no enzymatic activity | SAMN04490193_5681 | Not Available | Negative | 5957804 - 5958670 | 31832.0 |
| sam-dependent methyltransferase | SAMN04490193_5682 | Not Available | Positive | 5958805 - 5960001 | 43908.0 |
| predicted arabinose efflux permease, mfs family | SAMN04490193_5683 | Not Available | Positive | 5960209 - 5961384 | 42402.9 |
| rep element-mobilizing transposase rayt | SAMN04490193_5684 | Not Available | Negative | 5961493 - 5961951 | 17789.3 |
| dihydroxyacid dehydratase | SAMN04490193_5685 | Not Available | Positive | 5962365 - 5964206 | 65653.6 |
| outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid | SAMN04490193_5686 | Not Available | Negative | 5964270 - 5966711 | 88585.4 |
| fecr family protein | SAMN04490193_5687 | Not Available | Negative | 5966843 - 5967799 | 35312.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04490193_5688 | Not Available | Negative | 5967796 - 5968329 | 20175.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





