Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell wall-associated hydrolase, nlpc family | SAMN04490193_5649 | Not Available | Positive | 5929965 - 5930600 | 23325.4 |
| twitching motility protein pilt | SAMN04490193_5650 | Not Available | Negative | 5930679 - 5931713 | 37589.7 |
| hypothetical protein | SAMN04490193_5651 | Not Available | Positive | 5931771 - 5932457 | 24625.3 |
| pyrroline-5-carboxylate reductase | SAMN04490193_5652 | Not Available | Positive | 5932491 - 5933309 | 28241.9 |
| yggt family protein | SAMN04490193_5653 | Not Available | Positive | 5933335 - 5933922 | 21861.2 |
| homoserine o-acetyltransferase | SAMN04490193_5654 | Not Available | Positive | 5934049 - 5935188 | 41678.4 |
| methionine biosynthesis protein metw | SAMN04490193_5655 | Not Available | Positive | 5935196 - 5935816 | 23422.9 |
| protein of unknown function | SAMN04490193_5656 | Not Available | Positive | 5935838 - 5936272 | 15667.8 |
| xtp/ditp diphosphohydrolase | SAMN04490193_5657 | Not Available | Positive | 5936269 - 5936865 | 21338.6 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN04490193_5658 | Not Available | Positive | 5936862 - 5938064 | 44169.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





