Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate decarboxylase beta subunit | SAMN04490193_5627 | Not Available | Negative | 5907652 - 5908494 | 29812.6 |
| malonate decarboxylase delta subunit | SAMN04490193_5628 | Not Available | Negative | 5908487 - 5908786 | 10771.7 |
| triphosphoribosyl-dephospho-coa synthase | SAMN04490193_5629 | Not Available | Negative | 5908786 - 5909619 | 29420.6 |
| malonate decarboxylase alpha subunit | SAMN04490193_5630 | Not Available | Negative | 5909620 - 5911290 | 61271.9 |
| proteic killer suppression protein | SAMN04490193_5633 | Not Available | Positive | 5912419 - 5912697 | 10987.2 |
| addiction module antidote protein, higa family | SAMN04490193_5634 | Not Available | Positive | 5912712 - 5912999 | 10695.9 |
| chemosensory pili system protein chpc | SAMN04490193_5635 | Not Available | Negative | 5913162 - 5913617 | 16458.2 |
| chemosensory pili system protein chpa (sensor histidine kinase/response regulator) | SAMN04490193_5636 | Not Available | Negative | 5913610 - 5919429 | 213467.0 |
| twitching motility protein pilj | SAMN04490193_5637 | Not Available | Negative | 5919526 - 5921577 | 72797.0 |
| twitching motility protein pili | SAMN04490193_5638 | Not Available | Negative | 5921574 - 5922098 | 19304.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





