Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylhomocysteinase | SAMN04490193_5607 | Not Available | Positive | 5888420 - 5889829 | 51329.6 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN04490193_5608 | Not Available | Positive | 5890002 - 5890847 | 31271.1 |
| hypothetical protein | SAMN04490193_5609 | Not Available | Positive | 5890932 - 5892014 | 41410.6 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN04490193_5610 | Not Available | Positive | 5892078 - 5892869 | 29189.1 |
| atp-dependent rna helicase rhle | SAMN04490193_5611 | Not Available | Positive | 5893091 - 5894983 | 68039.9 |
| polyisoprenoid-binding protein ycei | SAMN04490193_5612 | Not Available | Negative | 5895273 - 5895851 | 20696.3 |
| cytochrome b561 | SAMN04490193_5613 | Not Available | Negative | 5895884 - 5896435 | 20015.0 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme | SAMN04490193_5614 | Not Available | Positive | 5896708 - 5898114 | 52595.2 |
| 16s rrna m(3)u-1498 methyltransferase | SAMN04490193_5615 | Not Available | Positive | 5898152 - 5898871 | 26088.4 |
| glutamate/aspartate transport system substrate-binding protein | SAMN04490193_5616 | Not Available | Negative | 5898916 - 5899818 | 32833.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





