Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug resistance transporter, emrb/qaca subfamily | SAMN04490193_5577 | Not Available | Positive | 5856517 - 5857944 | 50516.6 |
| atp-dependent rna helicase dbpa | SAMN04490193_5578 | Not Available | Positive | 5858027 - 5859412 | 49917.7 |
| hypothetical protein | SAMN04490193_5579 | Not Available | Positive | 5859577 - 5860755 | 42609.0 |
| tigr01666 family membrane protein | SAMN04490193_5580 | Not Available | Positive | 5860901 - 5863084 | 80362.7 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN04490193_5581 | Not Available | Negative | 5863111 - 5863848 | 27544.1 |
| elaa protein | SAMN04490193_5582 | Not Available | Positive | 5864050 - 5864502 | 17067.5 |
| hypothetical protein | SAMN04490193_5583 | Not Available | Negative | 5864525 - 5864821 | 11004.0 |
| hypothetical protein | SAMN04490193_5584 | Not Available | Negative | 5864841 - 5865341 | 19260.3 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_5585 | Not Available | Negative | 5865385 - 5867490 | 78604.5 |
| alginate lyase | SAMN04490193_5586 | Not Available | Positive | 5867799 - 5868464 | 24697.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





