Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/proline transport system substrate-binding protein | SAMN04490193_5567 | Not Available | Positive | 5842885 - 5843832 | 34496.4 |
| glycine betaine/proline transport system permease protein | SAMN04490193_5568 | Not Available | Positive | 5843902 - 5844747 | 30320.3 |
| glycine betaine/proline transport system atp-binding protein | SAMN04490193_5569 | Not Available | Positive | 5844744 - 5845922 | 43507.1 |
| choline/glycine/proline betaine transport protein | SAMN04490193_5570 | Not Available | Negative | 5846033 - 5848024 | 72973.9 |
| transcriptional regulator, tetr family | SAMN04490193_5571 | Not Available | Positive | 5848358 - 5848951 | 22105.0 |
| betaine aldehyde dehydrogenase | SAMN04490193_5572 | Not Available | Positive | 5849062 - 5850534 | 53101.1 |
| choline dehydrogenase | SAMN04490193_5573 | Not Available | Positive | 5850698 - 5852401 | 62780.5 |
| predicted zn-dependent protease or its inactivated homolog | SAMN04490193_5574 | Not Available | Positive | 5852607 - 5854049 | 52351.6 |
| predicted zn-dependent protease or its inactivated homolog | SAMN04490193_5575 | Not Available | Positive | 5854049 - 5855365 | 47783.2 |
| rhamnosyltransferase subunit a | SAMN04490193_5576 | Not Available | Positive | 5855590 - 5856480 | 32901.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





