Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_5557 | Not Available | Negative | 5831649 - 5832824 | 42758.2 |
| transcriptional regulator, arac family with amidase-like domain | SAMN04490193_5558 | Not Available | Negative | 5832893 - 5833870 | 36467.0 |
| glycine betaine/proline transport system substrate-binding protein | SAMN04490193_5559 | Not Available | Positive | 5834031 - 5834975 | 34340.4 |
| uncharacterized conserved protein, duf849 family | SAMN04490193_5560 | Not Available | Positive | 5835063 - 5835950 | 31513.3 |
| carnitine 3-dehydrogenase | SAMN04490193_5561 | Not Available | Positive | 5836034 - 5836999 | 34780.8 |
| acyl-coa thioester hydrolase | SAMN04490193_5562 | Not Available | Positive | 5837013 - 5837489 | 17437.9 |
| gamma-butyrobetaine dioxygenase | SAMN04490193_5563 | Not Available | Positive | 5837499 - 5838659 | 44059.2 |
| hypothetical protein | SAMN04490193_5564 | Not Available | Positive | 5839128 - 5839391 | 9343.3 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04490193_5565 | Not Available | Negative | 5839435 - 5840538 | 41016.6 |
| l-serine ammonia-lyase | SAMN04490193_5566 | Not Available | Negative | 5841093 - 5842469 | 49293.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





