Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit alpha | SAMN04490193_5526 | Not Available | Negative | 5799302 - 5802319 | 109382.0 |
| sarcosine oxidase subunit delta | SAMN04490193_5527 | Not Available | Negative | 5802316 - 5802618 | 11566.5 |
| sarcosine oxidase subunit beta | SAMN04490193_5528 | Not Available | Negative | 5802634 - 5803884 | 45168.9 |
| serine hydroxymethyltransferase | SAMN04490193_5529 | Not Available | Negative | 5803907 - 5805160 | 44654.2 |
| trax protein | SAMN04490193_5530 | Not Available | Negative | 5805412 - 5806122 | 26351.3 |
| l-threonine aldolase | SAMN04490193_5531 | Not Available | Positive | 5806231 - 5807271 | 38017.9 |
| ferredoxin-nadp reductase | SAMN04490193_5532 | Not Available | Negative | 5807358 - 5808458 | 40575.7 |
| rieske 2fe-2s family protein | SAMN04490193_5533 | Not Available | Positive | 5808740 - 5810035 | 48873.4 |
| general secretion pathway protein g | SAMN04490193_5534 | Not Available | Positive | 5810964 - 5811458 | 18536.9 |
| type ii secretion system protein g (gspg) | SAMN04490193_5535 | Not Available | Positive | 5811433 - 5811813 | 14268.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





