Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMN04490193_5515 | Not Available | Negative | 5789800 - 5791173 | 51054.1 |
| two-component system, ompr family, sensor histidine kinase crec | SAMN04490193_5516 | Not Available | Negative | 5791225 - 5792664 | 52560.3 |
| two-component system, ompr family, catabolic regulation response regulator creb | SAMN04490193_5517 | Not Available | Negative | 5792664 - 5793332 | 24608.5 |
| uncharacterized conserved protein | SAMN04490193_5518 | Not Available | Negative | 5793342 - 5793842 | 18519.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04490193_5519 | Not Available | Positive | 5794016 - 5794903 | 33929.6 |
| protein of unknown function vcgc/vcge | SAMN04490193_5520 | Not Available | Negative | 5794900 - 5795472 | 18536.0 |
| anti-sigma-k factor rska | SAMN04490193_5521 | Not Available | Positive | 5795611 - 5796069 | 16037.3 |
| glutathione-independent formaldehyde dehydrogenase | SAMN04490193_5523 | Not Available | Negative | 5796205 - 5797404 | 42119.7 |
| formyltetrahydrofolate deformylase | SAMN04490193_5524 | Not Available | Negative | 5797524 - 5798381 | 32280.6 |
| sarcosine oxidase subunit gamma | SAMN04490193_5525 | Not Available | Negative | 5798524 - 5799156 | 22710.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





