Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-sialoglycoprotein endopeptidase | SAMN04490193_5464 | Not Available | Negative | 5734366 - 5735391 | 36474.2 |
| ssu ribosomal protein s21p | SAMN04490193_5465 | Not Available | Positive | 5735595 - 5735810 | 8386.25 |
| dna primase | SAMN04490193_5466 | Not Available | Positive | 5736256 - 5738226 | 72863.5 |
| rna polymerase, sigma 70 subunit, rpod | SAMN04490193_5467 | Not Available | Positive | 5738294 - 5740144 | 69352.9 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_5468 | Not Available | Positive | 5740266 - 5744009 | 139830.0 |
| Trna-met | Not Available | Not Available | Positive | 5744025 - 5744101 | Not Available |
| hypothetical protein | SAMN04490193_5470 | Not Available | Negative | 5744176 - 5744601 | 15904.8 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_5471 | Not Available | Positive | 5744713 - 5745582 | 32042.6 |
| dna-binding transcriptional regulator, lrp family | SAMN04490193_5472 | Not Available | Positive | 5745619 - 5746065 | 16221.7 |
| lysine 2-monooxygenase | SAMN04490193_5473 | Not Available | Positive | 5746213 - 5747916 | 62669.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





