Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycolate phosphatase | SAMN04490193_5431 | Not Available | Negative | 5701956 - 5702774 | 29814.4 |
| ribulose-5-phosphate 3-epimerase | SAMN04490193_5432 | Not Available | Negative | 5702771 - 5703445 | 24097.3 |
| alcohol dehydrogenase, class iv | SAMN04490193_5433 | Not Available | Negative | 5703530 - 5704678 | 39767.1 |
| putative spermidine/putrescine transport system permease protein | SAMN04490193_5434 | Not Available | Negative | 5704795 - 5705619 | 29499.1 |
| putative spermidine/putrescine transport system permease protein | SAMN04490193_5435 | Not Available | Negative | 5705632 - 5706864 | 45173.2 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN04490193_5437 | Not Available | Negative | 5707004 - 5708044 | 37799.9 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN04490193_5438 | Not Available | Negative | 5708088 - 5709200 | 40824.3 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04490193_5439 | Not Available | Negative | 5709426 - 5710055 | 22723.0 |
| pas domain s-box-containing protein | SAMN04490193_5440 | Not Available | Negative | 5710074 - 5712068 | 73881.2 |
| protein of unknown function | SAMN04490193_5441 | Not Available | Positive | 5712146 - 5713120 | 34766.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





