Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate kinase | SAMN04490193_5323 | Not Available | Negative | 5609441 - 5610406 | 32758.5 |
| nusb antitermination factor | SAMN04490193_5324 | Not Available | Negative | 5610425 - 5610925 | 18728.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN04490193_5325 | Not Available | Negative | 5610922 - 5611398 | 16451.0 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase /gtp cyclohydrolase ii | SAMN04490193_5326 | Not Available | Negative | 5611487 - 5612578 | 39383.7 |
| riboflavin synthase alpha chain | SAMN04490193_5327 | Not Available | Negative | 5612594 - 5613256 | 23191.9 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | SAMN04490193_5328 | Not Available | Negative | 5613304 - 5614440 | 39714.2 |
| transcriptional repressor nrdr | SAMN04490193_5329 | Not Available | Negative | 5614437 - 5614907 | 17945.6 |
| uncharacterized lipoprotein ybay | SAMN04490193_5330 | Not Available | Positive | 5615048 - 5615503 | 16048.6 |
| predicted nicotinamide n-methyase | SAMN04490193_5331 | Not Available | Positive | 5615500 - 5616153 | 24117.8 |
| abortive infection bacteriophage resistance protein | SAMN04490193_5332 | Not Available | Positive | 5616417 - 5617439 | 40045.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





