Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ygib, involved in bioifilm formation, upf0441/duf1190 family | SAMN04490193_5303 | Not Available | Negative | 5588810 - 5589520 | 24915.6 |
| putative membrane protein | SAMN04490193_5304 | Not Available | Negative | 5589539 - 5589967 | 14845.6 |
| protein of unknown function | SAMN04490193_5305 | Not Available | Negative | 5589983 - 5590654 | 24443.7 |
| voltage-gated potassium channel | SAMN04490193_5306 | Not Available | Negative | 5590641 - 5591675 | 36804.7 |
| rhomboid family protein | SAMN04490193_5307 | Not Available | Negative | 5591709 - 5592269 | 19709.8 |
| phage shock protein a | SAMN04490193_5308 | Not Available | Negative | 5592327 - 5593025 | 25216.7 |
| hypothetical protein | SAMN04490193_5309 | Not Available | Negative | 5593043 - 5593732 | 25140.0 |
| nicotinamidase-related amidase | SAMN04490193_5310 | Not Available | Positive | 5593994 - 5594626 | 23220.7 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN04490193_5311 | Not Available | Negative | 5594675 - 5595706 | 38998.9 |
| hypothetical protein | SAMN04490193_5312 | Not Available | Positive | 5596185 - 5596688 | 18193.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





