Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine ammonia-lyase light chain | SAMN04490193_5291 | Not Available | Positive | 5579444 - 5580262 | 29925.7 |
| ribosomal protein s18 acetylase rimi | SAMN04490193_5292 | Not Available | Positive | 5580355 - 5580813 | 17719.2 |
| membrane-associated protein | SAMN04490193_5293 | Not Available | Positive | 5581114 - 5581770 | 24057.1 |
| hypothetical protein | SAMN04490193_5294 | Not Available | Positive | 5581777 - 5582592 | 31208.4 |
| inorganic pyrophosphatase | SAMN04490193_5295 | Not Available | Positive | 5582668 - 5583228 | 20607.7 |
| phage repressor protein c, contains cro/c1-type hth and peptisase s24 domains | SAMN04490193_5296 | Not Available | Positive | 5583443 - 5584216 | 29062.6 |
| hypothetical protein | SAMN04490193_5297 | Not Available | Negative | 5584517 - 5584753 | 8436.17 |
| protein of unknown function | SAMN04490193_5300 | Not Available | Positive | 5585820 - 5586464 | 24745.6 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN04490193_5301 | Not Available | Positive | 5586461 - 5587549 | 40819.0 |
| glutathionylspermidine synthase | SAMN04490193_5302 | Not Available | Negative | 5587640 - 5588797 | 44228.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





