Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl dehydratase | SAMN04490193_5281 | Not Available | Positive | 5567365 - 5567820 | 16773.4 |
| uncharacterized conserved protein | SAMN04490193_5282 | Not Available | Positive | 5567926 - 5569644 | 62254.5 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04490193_5283 | Not Available | Positive | 5569674 - 5570315 | 23440.7 |
| uncharacterized conserved protein ycek | SAMN04490193_5284 | Not Available | Negative | 5570389 - 5570673 | 9461.66 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN04490193_5285 | Not Available | Negative | 5570666 - 5571295 | 22581.4 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | SAMN04490193_5286 | Not Available | Negative | 5571292 - 5572641 | 48412.1 |
| transcriptional regulator of acetoin/glycerol metabolism | SAMN04490193_5287 | Not Available | Negative | 5572715 - 5574610 | 69482.3 |
| aldehyde dehydrogenase | SAMN04490193_5288 | Not Available | Positive | 5574883 - 5576403 | 54949.8 |
| ethanolamine permease | SAMN04490193_5289 | Not Available | Positive | 5576547 - 5577980 | 50389.6 |
| ethanolamine ammonia-lyase heavy chain | SAMN04490193_5290 | Not Available | Positive | 5578038 - 5579432 | 49967.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





