Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN04490193_5219 | Not Available | Negative | 5506908 - 5507477 | 21502.7 |
| acetoin utilization deacetylase acuc | SAMN04490193_5220 | Not Available | Positive | 5507554 - 5508474 | 33914.5 |
| hypothetical protein | SAMN04490193_5221 | Not Available | Positive | 5508646 - 5509872 | 43422.8 |
| superfamily ii dna and rna helicase | SAMN04490193_5222 | Not Available | Negative | 5509990 - 5511327 | 48649.5 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04490193_5223 | Not Available | Negative | 5511376 - 5512272 | 31838.9 |
| transcriptional regulator, asnc family | SAMN04490193_5224 | Not Available | Positive | 5512398 - 5512895 | 17985.9 |
| dna polymerase-3 subunit epsilon | SAMN04490193_5225 | Not Available | Negative | 5513194 - 5513805 | 22635.6 |
| uncharacterized conserved protein, laba/duf88 family | SAMN04490193_5226 | Not Available | Negative | 5513852 - 5514328 | 17497.9 |
| hypothetical protein | SAMN04490193_5227 | Not Available | Negative | 5514446 - 5515189 | 26118.4 |
| uncharacterised protein family (upf0259) | SAMN04490193_5228 | Not Available | Positive | 5515361 - 5516029 | 24664.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





