Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | SAMN04490193_5209 | Not Available | Positive | 5496740 - 5497588 | 30416.7 |
| dna-binding transcriptional regulator, acrr family | SAMN04490193_5210 | Not Available | Negative | 5497635 - 5498300 | 25721.8 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN04490193_5211 | Not Available | Negative | 5498381 - 5500282 | 70175.3 |
| mfs transporter, acs family, hexuronate transporter | SAMN04490193_5212 | Not Available | Positive | 5500506 - 5501840 | 48862.7 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04490193_5213 | Not Available | Negative | 5501841 - 5502719 | 31865.2 |
| hypothetical protein | SAMN04490193_5214 | Not Available | Positive | 5502919 - 5503332 | 14537.4 |
| hypothetical protein | SAMN04490193_5215 | Not Available | Positive | 5503501 - 5504388 | 31981.7 |
| hypothetical protein | SAMN04490193_5216 | Not Available | Positive | 5504389 - 5505369 | 35885.5 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN04490193_5217 | Not Available | Negative | 5505413 - 5506000 | 21087.3 |
| acyl-coa thioesterase-2 | SAMN04490193_5218 | Not Available | Negative | 5505997 - 5506866 | 32447.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





