Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_5169 | Not Available | Positive | 5447996 - 5449081 | 41254.2 |
| hypothetical protein | SAMN04490193_5170 | Not Available | Positive | 5449604 - 5449960 | 13829.1 |
| transcription elongation factor, grea/greb family | SAMN04490193_5171 | Not Available | Positive | 5450031 - 5450528 | 18024.0 |
| glutamate dehydrogenase (nadp) | SAMN04490193_5172 | Not Available | Negative | 5450525 - 5451862 | 48397.2 |
| atp-binding cassette protein, chvd family | SAMN04490193_5173 | Not Available | Negative | 5452215 - 5453879 | 61547.2 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_5174 | Not Available | Positive | 5454165 - 5458016 | 145522.0 |
| serine hydroxymethyltransferase | SAMN04490193_5175 | Not Available | Positive | 5458159 - 5459412 | 44855.6 |
| gtpase, g3e family | SAMN04490193_5176 | Not Available | Negative | 5459539 - 5460498 | 35666.9 |
| uncharacterized short protein ybdd, duf466 family | SAMN04490193_5177 | Not Available | Negative | 5460634 - 5460831 | 7567.19 |
| carbon starvation protein | SAMN04490193_5178 | Not Available | Negative | 5460847 - 5462913 | 73941.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





