Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd-gyp domain, c-di-gmp phosphodiesterase class ii (or its inactivated variant) | SAMN04490193_5158 | Not Available | Positive | 5434144 - 5435259 | 40487.9 |
| methyl-accepting chemotaxis sensory transducer with cache sensor | SAMN04490193_5159 | Not Available | Positive | 5435391 - 5437553 | 76505.3 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN04490193_5160 | Not Available | Positive | 5437703 - 5439142 | 53601.2 |
| tigr00645 family protein | SAMN04490193_5161 | Not Available | Negative | 5439158 - 5439646 | 18305.0 |
| hypothetical protein | SAMN04490193_5162 | Not Available | Positive | 5439811 - 5441634 | 67335.0 |
| hypothetical protein | SAMN04490193_5163 | Not Available | Negative | 5441641 - 5441958 | 11578.1 |
| predicted atp-dependent protease | SAMN04490193_5165 | Not Available | Negative | 5442258 - 5444696 | 89104.1 |
| protein of unknown function | SAMN04490193_5166 | Not Available | Positive | 5444965 - 5445453 | 17006.1 |
| protein of unknown function | SAMN04490193_5167 | Not Available | Positive | 5445546 - 5447399 | 70315.3 |
| isochorismate pyruvate lyase | SAMN04490193_5168 | Not Available | Positive | 5447448 - 5447759 | 11483.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





