Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_5087 | Not Available | Negative | 5376234 - 5376536 | 10911.4 |
| ribosome association toxin past (rata) of the ratab toxin-antitoxin module | SAMN04490193_5088 | Not Available | Negative | 5376529 - 5376963 | 15774.9 |
| ssra-binding protein | SAMN04490193_5089 | Not Available | Positive | 5377132 - 5377614 | 18334.2 |
| transcriptional regulator, gntr family | SAMN04490193_5090 | Not Available | Negative | 5377652 - 5378419 | 28841.3 |
| lactate permease | SAMN04490193_5091 | Not Available | Positive | 5378681 - 5380375 | 59638.0 |
| d-lactate dehydrogenase | SAMN04490193_5092 | Not Available | Positive | 5380481 - 5383291 | 102205.0 |
| hypothetical protein | SAMN04490193_5093 | Not Available | Positive | 5383429 - 5383707 | 9430.27 |
| Tmrna,resume consensus sequence (at 90): tatagttgccaatgacga | Not Available | Not Available | Positive | 5383801 - 5384197 | Not Available |
| hypothetical protein | SAMN04490193_5095 | Not Available | Positive | 5384317 - 5385159 | 32332.7 |
| hypothetical protein | SAMN04490193_5096 | Not Available | Positive | 5385790 - 5386089 | 11682.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





