Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydromonapterin reductase / dihydrofolate reductase | SAMN04490193_4958 | Not Available | Positive | 5241400 - 5242110 | 25468.6 |
| gtp cyclohydrolase i | SAMN04490193_4959 | Not Available | Positive | 5242131 - 5242691 | 20944.7 |
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | SAMN04490193_4960 | Not Available | Positive | 5242694 - 5243065 | 13916.9 |
| hypothetical protein | SAMN04490193_4961 | Not Available | Positive | 5243089 - 5243385 | 11339.2 |
| hopj type iii effector protein | SAMN04490193_4962 | Not Available | Positive | 5243378 - 5243719 | 11805.8 |
| thioredoxin reductase (nadph) | SAMN04490193_4963 | Not Available | Negative | 5243816 - 5244778 | 33966.4 |
| cysz protein | SAMN04490193_4964 | Not Available | Positive | 5245073 - 5245837 | 28731.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04490193_4965 | Not Available | Positive | 5245859 - 5247070 | 45307.3 |
| hypothetical protein | SAMN04490193_4966 | Not Available | Positive | 5247255 - 5247800 | 20962.7 |
| 2,4-dienoyl-coa reductase | SAMN04490193_4967 | Not Available | Negative | 5247926 - 5249029 | 40075.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





