Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04490193_4948 | Not Available | Negative | 5234012 - 5234914 | 34446.5 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN04490193_4949 | Not Available | Negative | 5234914 - 5235696 | 27959.7 |
| putative effector of murein hydrolase | SAMN04490193_4950 | Not Available | Negative | 5235850 - 5236536 | 24175.5 |
| holin-like protein | SAMN04490193_4951 | Not Available | Negative | 5236526 - 5236912 | 13946.9 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_4952 | Not Available | Positive | 5237011 - 5237907 | 32944.1 |
| mioc protein | SAMN04490193_4953 | Not Available | Negative | 5237888 - 5238343 | 16030.0 |
| pas domain s-box-containing protein | SAMN04490193_4954 | Not Available | Positive | 5238473 - 5238940 | 17344.7 |
| hypothetical protein | SAMN04490193_4955 | Not Available | Positive | 5239000 - 5239605 | 22968.6 |
| dna-binding transcriptional regulator, merr family | SAMN04490193_4956 | Not Available | Negative | 5239608 - 5240603 | 37235.0 |
| hypothetical protein | SAMN04490193_4957 | Not Available | Positive | 5240782 - 5241342 | 20741.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





