Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase catalytic domain | SAMN04490193_4845 | Not Available | Positive | 5108723 - 5109226 | 19155.2 |
| transcriptional regulator, gntr family | SAMN04490193_4846 | Not Available | Positive | 5109489 - 5110247 | 28331.2 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN04490193_4847 | Not Available | Positive | 5110258 - 5111364 | 39295.4 |
| glutamine--fructose-6-phosphate transaminase | SAMN04490193_4848 | Not Available | Positive | 5111345 - 5112367 | 36009.6 |
| phosphocarrier protein hpr /phosphoenolpyruvate--protein phosphotransferase /pts system iia component, glc family | SAMN04490193_4849 | Not Available | Positive | 5112397 - 5114907 | 89122.2 |
| pts system n-acetylglucosamine-specific iib component, glc family /pts system n-acetylglucosamine-specific iic component, glc family | SAMN04490193_4850 | Not Available | Positive | 5114935 - 5116641 | 60615.8 |
| hypothetical protein | SAMN04490193_4851 | Not Available | Positive | 5116722 - 5122448 | 212218.0 |
| hypothetical protein | SAMN04490193_4852 | Not Available | Negative | 5122543 - 5122854 | 11461.6 |
| phosphoribosylformylglycinamidine synthase | SAMN04490193_4853 | Not Available | Negative | 5122859 - 5126755 | 140701.0 |
| membrane-bound lytic murein transglycosylase f | SAMN04490193_4854 | Not Available | Positive | 5127108 - 5128502 | 52227.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





