Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN04490193_4835 | Not Available | Negative | 5099292 - 5100668 | 49254.8 |
| abc-type uncharacterized transport system, permease component | SAMN04490193_4836 | Not Available | Positive | 5100911 - 5101714 | 29260.0 |
| mg2+ and co2+ transporter corb, contains duf21, cbs pair, and corc-hlyc domains | SAMN04490193_4837 | Not Available | Positive | 5101727 - 5102965 | 45470.2 |
| metabolite-proton symporter | SAMN04490193_4838 | Not Available | Positive | 5103323 - 5104633 | 46119.1 |
| formate-dependent phosphoribosylglycinamide formyltransferase | SAMN04490193_4839 | Not Available | Negative | 5104731 - 5105912 | 42325.8 |
| hypothetical protein | SAMN04490193_4840 | Not Available | Negative | 5105982 - 5106449 | 16843.0 |
| hypothetical protein | SAMN04490193_4841 | Not Available | Negative | 5106613 - 5106828 | 7710.27 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN04490193_4842 | Not Available | Negative | 5106825 - 5107349 | 18739.5 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN04490193_4843 | Not Available | Negative | 5107385 - 5107987 | 22470.8 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04490193_4844 | Not Available | Positive | 5108134 - 5108685 | 20686.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





