Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_4815 | Not Available | Positive | 5079517 - 5080470 | 35710.1 |
| dna polymerase-4 | SAMN04490193_4816 | Not Available | Negative | 5080539 - 5081660 | 41705.1 |
| Trna-met | Not Available | Not Available | Positive | 5081881 - 5081957 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 5082218 - 5082294 | Not Available |
| phosphatidylglycerol lysyltransferase | SAMN04490193_4819 | Not Available | Positive | 5082561 - 5085203 | 96535.7 |
| type iv secretory pathway, virj component | SAMN04490193_4820 | Not Available | Positive | 5085203 - 5086489 | 46601.5 |
| single-stranded-dna-specific exonuclease | SAMN04490193_4821 | Not Available | Negative | 5086625 - 5088334 | 62120.2 |
| uncharacterized conserved protein yaeq, suppresses rfah defect | SAMN04490193_4822 | Not Available | Negative | 5088419 - 5088961 | 20712.7 |
| formyl-coa transferase | SAMN04490193_4823 | Not Available | Positive | 5089110 - 5090309 | 43408.6 |
| conserved hypothetical protein | SAMN04490193_4824 | Not Available | Positive | 5090309 - 5091193 | 32851.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





