Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis sensory transducer with cache sensor | SAMN04490193_4794 | Not Available | Positive | 5057312 - 5059450 | 75994.5 |
| nitroreductase | SAMN04490193_4795 | Not Available | Negative | 5059514 - 5060077 | 20059.3 |
| cxxc motif-containing protein, duf1111 family | SAMN04490193_4796 | Not Available | Positive | 5060218 - 5061657 | 51862.6 |
| hypothetical protein | SAMN04490193_4797 | Not Available | Positive | 5061689 - 5062753 | 38562.9 |
| hypothetical protein | SAMN04490193_4798 | Not Available | Positive | 5062753 - 5063853 | 40038.1 |
| hypothetical protein | SAMN04490193_4799 | Not Available | Negative | 5064154 - 5064381 | 7936.99 |
| lipopolysaccharide kinase (kdo/waap) family protein | SAMN04490193_4800 | Not Available | Negative | 5064378 - 5065097 | 27862.1 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04490193_4801 | Not Available | Negative | 5065102 - 5065782 | 25945.4 |
| signal transduction histidine kinase | SAMN04490193_4802 | Not Available | Negative | 5065971 - 5067251 | 47622.5 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04490193_4803 | Not Available | Negative | 5067241 - 5067924 | 25375.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





