Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase | SAMN04490193_0262 | Not Available | Negative | 243092 - 244390 | 46853.7 |
| protein of unknown function | SAMN04490193_0263 | Not Available | Negative | 244451 - 244624 | 6618.23 |
| putative endonuclease, protein of unknown function | SAMN04490193_0264 | Not Available | Negative | 244678 - 245307 | 24388.2 |
| hypothetical protein | SAMN04490193_0265 | Not Available | Positive | 245412 - 245879 | 17395.3 |
| hypothetical protein | SAMN04490193_0267 | Not Available | Positive | 246641 - 246856 | 8213.58 |
| hypothetical protein | SAMN04490193_0268 | Not Available | Negative | 246853 - 247053 | 7322.53 |
| dephospho-coa kinase | SAMN04490193_0269 | Not Available | Negative | 247050 - 247673 | 23045.7 |
| type 4 prepilin peptidase 1 aspartic peptidase. merops family a24a | SAMN04490193_0270 | Not Available | Negative | 247670 - 248536 | 31940.9 |
| type iv pilus assembly protein pilc | SAMN04490193_0271 | Not Available | Negative | 248533 - 249741 | 43065.8 |
| type iv pilus assembly protein pila | SAMN04490193_0272 | Not Available | Positive | 249941 - 250354 | 13796.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





