Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrr family helix-turn-helix domain-containing protein | SAMN04490193_4703 | Not Available | Positive | 4957629 - 4959137 | 54774.1 |
| glycine cleavage system h protein | SAMN04490193_4704 | Not Available | Positive | 4959446 - 4959829 | 13690.9 |
| glycine dehydrogenase (decarboxylating) alpha subunit /glycine dehydrogenase (decarboxylating) beta subunit | SAMN04490193_4705 | Not Available | Positive | 4959840 - 4962680 | 102223.0 |
| l-serine ammonia-lyase | SAMN04490193_4706 | Not Available | Positive | 4962840 - 4964216 | 48683.8 |
| aminomethyltransferase | SAMN04490193_4707 | Not Available | Positive | 4964256 - 4965380 | 40474.0 |
| cold-shock dna-binding protein family | SAMN04490193_4708 | Not Available | Positive | 4965774 - 4965986 | 7679.02 |
| uncharacterized membrane protein yckc, rdd family | SAMN04490193_4709 | Not Available | Positive | 4966081 - 4966569 | 18380.7 |
| quinolinate synthetase | SAMN04490193_4710 | Not Available | Negative | 4966645 - 4967703 | 38249.1 |
| hypothetical protein | SAMN04490193_4711 | Not Available | Negative | 4967942 - 4969516 | 55814.1 |
| acyl carrier protein | SAMN04490193_4712 | Not Available | Positive | 4969718 - 4970287 | 20573.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





