Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04490193_4692 | Not Available | Positive | 4946127 - 4946804 | 24956.2 |
| protein refolding chaperone spy/cpxp family | SAMN04490193_4693 | Not Available | Positive | 4946987 - 4947451 | 17052.6 |
| signal transduction histidine kinase | SAMN04490193_4694 | Not Available | Positive | 4947520 - 4948863 | 49996.9 |
| coa-transferase family iii | SAMN04490193_4695 | Not Available | Positive | 4948904 - 4950253 | 48512.9 |
| arginine:ornithine antiporter, apa family | SAMN04490193_4696 | Not Available | Negative | 4950358 - 4951785 | 50751.3 |
| arginine:ornithine antiporter, apa family | SAMN04490193_4697 | Not Available | Positive | 4952228 - 4953655 | 51174.0 |
| arginine deiminase | SAMN04490193_4698 | Not Available | Positive | 4953680 - 4954936 | 46469.6 |
| ornithine carbamoyltransferase | SAMN04490193_4699 | Not Available | Positive | 4954949 - 4955959 | 37868.4 |
| carbamate kinase | SAMN04490193_4700 | Not Available | Positive | 4956108 - 4957037 | 32647.4 |
| protein of unknown function | SAMN04490193_4701 | Not Available | Positive | 4957056 - 4957418 | 13895.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





