Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-binding protein | SAMN04490193_4662 | Not Available | Negative | 4918866 - 4920152 | 45586.3 |
| mannose or cellobiose epimerase, n-acyl-d-glucosamine 2-epimerase family | SAMN04490193_4663 | Not Available | Negative | 4920257 - 4921516 | 45990.1 |
| hypothetical protein | SAMN04490193_4664 | Not Available | Negative | 4921667 - 4922512 | 29961.3 |
| nucleoside-diphosphate-sugar epimerase | SAMN04490193_4665 | Not Available | Negative | 4922640 - 4923638 | 37200.8 |
| lysr family transcriptional regulator, chromosome initiation inhibitor | SAMN04490193_4666 | Not Available | Negative | 4923691 - 4924584 | 32675.6 |
| hypothetical protein | SAMN04490193_4667 | Not Available | Positive | 4924685 - 4925086 | 14241.0 |
| l-lysine exporter family protein lyse/argo | SAMN04490193_4668 | Not Available | Positive | 4925092 - 4925691 | 21137.3 |
| superoxide dismutase, fe-mn family | SAMN04490193_4669 | Not Available | Positive | 4925870 - 4926466 | 21978.6 |
| hypothetical protein | SAMN04490193_4670 | Not Available | Positive | 4926616 - 4926792 | 5923.15 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_4671 | Not Available | Positive | 4927028 - 4929079 | 77064.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





