Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenocysteine lyase/cysteine desulfurase | SAMN04490193_4652 | Not Available | Positive | 4908134 - 4909309 | 43745.5 |
| 2-keto-3-deoxy-phosphogluconate aldolase | SAMN04490193_4653 | Not Available | Negative | 4909412 - 4910077 | 23325.6 |
| 6-phosphogluconolactonase | SAMN04490193_4654 | Not Available | Negative | 4910095 - 4910808 | 25215.3 |
| glucose-6-phosphate 1-dehydrogenase | SAMN04490193_4655 | Not Available | Negative | 4910795 - 4912261 | 55012.9 |
| transcriptional regulator, rpir family | SAMN04490193_4656 | Not Available | Positive | 4912472 - 4913341 | 31570.1 |
| d-hexose-6-phosphate mutarotase | SAMN04490193_4657 | Not Available | Negative | 4913497 - 4914342 | 31900.6 |
| porin, oprb family | SAMN04490193_4658 | Not Available | Negative | 4914443 - 4915789 | 49613.9 |
| glucose abc transporter atp-binding protein | SAMN04490193_4659 | Not Available | Negative | 4915876 - 4917036 | 42042.2 |
| glucose abc transporter membrane protein | SAMN04490193_4660 | Not Available | Negative | 4917039 - 4917884 | 30503.0 |
| glucose abc transporter membrane protein | SAMN04490193_4661 | Not Available | Negative | 4917877 - 4918785 | 33810.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





