Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoin racemase | SAMN04490193_4467 | Not Available | Positive | 4733015 - 4733743 | 25955.3 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_4468 | Not Available | Negative | 4733757 - 4734680 | 33301.3 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04490193_4469 | Not Available | Positive | 4734807 - 4735553 | 25324.2 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04490193_4470 | Not Available | Negative | 4735602 - 4736291 | 24910.9 |
| mrna-degrading endonuclease rele, toxin component of the relbe toxin-antitoxin system | SAMN04490193_4471 | Not Available | Positive | 4736551 - 4736862 | 12128.5 |
| helix-turn-helix domain-containing protein | SAMN04490193_4472 | Not Available | Positive | 4736786 - 4737112 | 12105.5 |
| protein of unknown function | SAMN04490193_4473 | Not Available | Positive | 4737162 - 4737527 | 13626.2 |
| protein of unknown function | SAMN04490193_4474 | Not Available | Positive | 4737686 - 4738159 | 17571.9 |
| hypothetical protein | SAMN04490193_4475 | Not Available | Positive | 4738251 - 4738586 | 11844.3 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04490193_4476 | Not Available | Positive | 4738649 - 4739689 | 36432.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





