Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa-ompf porin, oop family | SAMN04490193_4437 | Not Available | Negative | 4698708 - 4699688 | 34526.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04490193_4438 | Not Available | Negative | 4699796 - 4700386 | 23248.9 |
| conserved tm helix | SAMN04490193_4439 | Not Available | Negative | 4700474 - 4701298 | 28978.6 |
| hypothetical protein | SAMN04490193_4440 | Not Available | Negative | 4701301 - 4701546 | 8834.6 |
| zinc transporter | SAMN04490193_4441 | Not Available | Negative | 4701633 - 4702628 | 37900.8 |
| regulator of ribonuclease activity a | SAMN04490193_4442 | Not Available | Negative | 4702654 - 4703145 | 17476.9 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN04490193_4443 | Not Available | Negative | 4703334 - 4704323 | 36151.3 |
| phosphoenolpyruvate synthase | SAMN04490193_4444 | Not Available | Negative | 4704428 - 4706803 | 86062.1 |
| hypothetical protein | SAMN04490193_4445 | Not Available | Positive | 4706981 - 4707799 | 30860.5 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN04490193_4446 | Not Available | Negative | 4707999 - 4709423 | 52445.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





