Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotate oxidase a | SAMN04490193_4426 | Not Available | Negative | 4688902 - 4689924 | 35820.6 |
| transglycosylase slt domain-containing protein | SAMN04490193_4427 | Not Available | Negative | 4690010 - 4690471 | 17412.7 |
| transcriptional regulatory protein, c terminal | SAMN04490193_4428 | Not Available | Negative | 4690464 - 4690859 | 14289.3 |
| hypothetical protein | SAMN04490193_4429 | Not Available | Negative | 4690862 - 4691041 | 6910.5 |
| type iii secretion protein c | SAMN04490193_4431 | Not Available | Negative | 4691254 - 4692705 | 53051.0 |
| nitrate/nitrite transport system substrate-binding protein | SAMN04490193_4432 | Not Available | Positive | 4692955 - 4694181 | 44898.1 |
| response regulator receiver and antar domain protein | SAMN04490193_4433 | Not Available | Positive | 4694195 - 4694770 | 21653.6 |
| mfs transporter, nnp family, nitrate/nitrite transporter | SAMN04490193_4434 | Not Available | Positive | 4694998 - 4696209 | 42691.9 |
| serine/threonine protein phosphatase prpc | SAMN04490193_4435 | Not Available | Positive | 4696173 - 4697879 | 63367.9 |
| uroporphyrinogen-iii c-methyltransferase | SAMN04490193_4436 | Not Available | Positive | 4697906 - 4698649 | 26358.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





