Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase cbb3-type subunit 4 | SAMN04490193_4383 | Not Available | Positive | 4641660 - 4641833 | 6378.74 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN04490193_4384 | Not Available | Positive | 4641830 - 4642807 | 35629.4 |
| prevent-host-death family protein | SAMN04490193_4385 | Not Available | Positive | 4642980 - 4643234 | 9259.99 |
| hypothetical protein | SAMN04490193_4386 | Not Available | Positive | 4643234 - 4643644 | 15017.3 |
| cytochrome c oxidase accessory protein fixg | SAMN04490193_4387 | Not Available | Positive | 4643852 - 4645279 | 53791.2 |
| hypothetical protein | SAMN04490193_4388 | Not Available | Positive | 4645295 - 4645834 | 20255.1 |
| cu2+-exporting atpase | SAMN04490193_4389 | Not Available | Positive | 4645843 - 4648293 | 87550.6 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN04490193_4390 | Not Available | Positive | 4648316 - 4648534 | 7710.11 |
| hypothetical protein | SAMN04490193_4391 | Not Available | Positive | 4648527 - 4649210 | 24224.9 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN04490193_4392 | Not Available | Positive | 4649313 - 4650695 | 52521.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





