Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp diphosphatase | SAMN04490193_4315 | Not Available | Negative | 4564673 - 4565506 | 31603.1 |
| gtp pyrophosphokinase | SAMN04490193_4316 | Not Available | Negative | 4565573 - 4567816 | 83600.8 |
| 23s rrna m(5)u-1939 methyltransferase | SAMN04490193_4317 | Not Available | Negative | 4567940 - 4569292 | 49563.0 |
| cysteine synthase b | SAMN04490193_4318 | Not Available | Negative | 4569292 - 4570194 | 32437.0 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 4570515 - 4572054 | 18.01 |
| dtw domain-containing protein yfip | SAMN04490193_4319 | Not Available | Negative | 4570679 - 4571284 | 21875.8 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_4320 | Not Available | Negative | 4571290 - 4572183 | 33265.3 |
| agmatinase | SAMN04490193_4321 | Not Available | Positive | 4572333 - 4573283 | 34293.4 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 4572563 - 4575457 | 18.01 |
| ketosteroid isomerase homolog | SAMN04490193_4322 | Not Available | Positive | 4573283 - 4573705 | 15633.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





