Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | SAMN04490193_4295 | Not Available | Negative | 4546474 - 4547529 | 36180.8 |
| adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase | SAMN04490193_4296 | Not Available | Negative | 4547526 - 4548047 | 19009.3 |
| adenosylcobyric acid synthase (glutamine-hydrolysing) | SAMN04490193_4297 | Not Available | Negative | 4548418 - 4549869 | 51484.9 |
| l-threonine o-3-phosphate decarboxylase | SAMN04490193_4298 | Not Available | Negative | 4549866 - 4550855 | 36645.2 |
| adenosylcobinamide-phosphate synthase | SAMN04490193_4299 | Not Available | Negative | 4550848 - 4551756 | 32743.5 |
| cob(ii)yrinic acid a,c-diamide reductase /5,6-dimethylbenzimidazole synthase | SAMN04490193_4300 | Not Available | Negative | 4551753 - 4552403 | 24271.4 |
| hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase | SAMN04490193_4301 | Not Available | Negative | 4552400 - 4553749 | 47824.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMN04490193_4302 | Not Available | Negative | 4553746 - 4554357 | 22540.4 |
| hypothetical protein | SAMN04490193_4303 | Not Available | Positive | 4554465 - 4554794 | 11980.2 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04490193_4304 | Not Available | Positive | 4554787 - 4556100 | 46595.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





