Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| geranyl-coa carboxylase beta subunit | SAMN04490193_4204 | Not Available | Positive | 4456348 - 4457964 | 57487.5 |
| citronellyl-coa dehydrogenase | SAMN04490193_4205 | Not Available | Positive | 4457981 - 4459138 | 42436.2 |
| isohexenylglutaconyl-coa hydratase | SAMN04490193_4206 | Not Available | Positive | 4459135 - 4459896 | 26648.4 |
| geranyl-coa carboxylase alpha subunit | SAMN04490193_4208 | Not Available | Positive | 4460721 - 4462604 | 68288.0 |
| inhibitor of the kina pathway to sporulation, predicted exonuclease | SAMN04490193_4209 | Not Available | Positive | 4462679 - 4463221 | 20721.0 |
| hypothetical protein | SAMN04490193_4210 | Not Available | Positive | 4463415 - 4463699 | 10161.0 |
| hypothetical protein | SAMN04490193_4211 | Not Available | Negative | 4463762 - 4464568 | 29391.2 |
| chew protein | SAMN04490193_4212 | Not Available | Negative | 4464608 - 4465543 | 34769.7 |
| hypothetical protein | SAMN04490193_4213 | Not Available | Positive | 4466094 - 4466543 | 16966.4 |
| signal transduction histidine kinase | SAMN04490193_4214 | Not Available | Positive | 4466899 - 4467792 | 32971.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





