Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04490193_0195 | Not Available | Negative | 185503 - 186186 | 25374.0 |
| group ii intron, maturase-specific domain | SAMN04490193_0196 | Not Available | Positive | 187294 - 187842 | 22376.5 |
| hypothetical protein | SAMN04490193_0197 | Not Available | Negative | 187859 - 188182 | 11991.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04490193_0199 | Not Available | Negative | 189575 - 190801 | 46493.3 |
| dna polymerase v | SAMN04490193_0202 | Not Available | Negative | 192542 - 192976 | 15652.0 |
| helicase conserved c-terminal domain-containing protein | SAMN04490193_0203 | Not Available | Negative | 193116 - 194375 | 46471.3 |
| rna-directed dna polymerase | SAMN04490193_0205 | Not Available | Negative | 194443 - 196161 | 65417.1 |
| type iii restriction enzyme, res subunit | SAMN04490193_0207 | Not Available | Negative | 196758 - 197774 | 38207.1 |
| hypothetical protein | SAMN04490193_0208 | Not Available | Negative | 197879 - 199336 | 54926.4 |
| hypothetical protein | SAMN04490193_0209 | Not Available | Negative | 199359 - 199958 | 22514.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





