Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoicase | SAMN04490193_4174 | Not Available | Positive | 4414038 - 4415033 | 36684.2 |
| ureidoglycolate lyase | SAMN04490193_4175 | Not Available | Positive | 4415186 - 4415689 | 18634.4 |
| uncharacterized membrane protein | SAMN04490193_4176 | Not Available | Positive | 4415741 - 4417030 | 46567.8 |
| nucleobase:cation symporter-2, ncs2 family | SAMN04490193_4177 | Not Available | Positive | 4417146 - 4418495 | 46797.5 |
| nucleoside-specific outer membrane channel protein tsx | SAMN04490193_4178 | Not Available | Positive | 4418726 - 4419511 | 29739.7 |
| hypothetical protein | SAMN04490193_4179 | Not Available | Negative | 4419421 - 4419624 | 7648.26 |
| nte family protein | SAMN04490193_4180 | Not Available | Negative | 4419621 - 4420763 | 40540.0 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN04490193_4181 | Not Available | Negative | 4420795 - 4421730 | 35967.9 |
| septum site-determining protein minc | SAMN04490193_4182 | Not Available | Positive | 4421850 - 4422587 | 26170.0 |
| septum site-determining protein mind | SAMN04490193_4183 | Not Available | Positive | 4422788 - 4423600 | 29219.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





